Insertion junction: CLIP2.052169_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052169
Chromosome:chromosome 1
Location:6892794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049300 intron
Cre01.g049350 (1 of 1) PTHR31412//PTHR31412:SF5 - FAMILY NOT NAMED // ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCAAGCGACGAGTTCTTGCAGTATCACACATAACCCATGCAAAACT
Internal bar code:TAAAACGTGGAGTGTCTGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2970
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGGCATTATGTCCGCT
Suggested primer 2:GGTTGGTCCATCGTCCAGTT