Insertion junction: CLIP2.052178_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052178
Chromosome:chromosome 1
Location:5482749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038800 MIP3 (1 of 1) K09875 - aquaporin SIP (SIP); Major intrinsic protein superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGCCATGCGCTTGCCCGCCCCATGCTGACAGCGGCTTCAGGCATAT
Internal bar code:TTTACCTAGCTCTGCACCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2325
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTATTCGGTGGCCCTA
Suggested primer 2:ACCAAGTTGCTGACACCACA