Insertion junction: CLIP2.052185_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052185
Chromosome:chromosome 8
Location:797940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360850 (1 of 1) K18798 - protein AFG1 (AFG1, LACE1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACATGATCGTGGTAATGGGTAGAAGAGCGAAAGTCCTTTCACCATA
Internal bar code:TATGGAAGGCTTTAGTGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1304
LEAP-Seq percent confirming:9.375
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTACGACGAGGTGGTT
Suggested primer 2:GAACACACTCACACGCACAC