Insertion junction: CLIP2.052188_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052188
Chromosome:chromosome 8
Location:1115801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362682 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTTACAGCTACATCAATCTGCGCGAGCTAACGGACAACGGCAACAAG
Internal bar code:CCTTAATGGTCCACGGTACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1905
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGTTGAGCTGAAGCAG
Suggested primer 2:AAGCTCGCAACCCAAGCTAT