Insertion junction: CLIP2.052190_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052190
Chromosome:chromosome 1
Location:1500009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008051 (1 of 10) PTHR12270//PTHR12270:SF6 - GLYCOSYLTRANSFERASE-RELATED // GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCAATACTAGGACTAGCATACCGGTGTGTGTGGGCAGCCGTCGCACAG
Internal bar code:GAGATTTGCTATTGCATAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:60.7143
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACCATCTTGGGGGAGGG
Suggested primer 2:GCTGTGCCTGTGTTTGTCTG