Insertion junction: CLIP2.052191_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052191
Chromosome:chromosome 12
Location:8459643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549850 (1 of 1) PF09445 - RNA cap guanine-N2 methyltransferase (Methyltransf_15) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACGCAGGTGCGCCACACACGGCCGGGCCGGCACCGGCTGCCCGCCGC
Internal bar code:CTTCGTGATCACTTATCTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4301
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCCTGTTGTGGCTACGG
Suggested primer 2:GTCGTCCGTGTTGTGTTGTG