Insertion junction: CLIP2.052193_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052193
Chromosome:chromosome 1
Location:6147044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043700 (1 of 1) PTHR13391//PTHR13391:SF0 - TUBULIN-RELATED PROTEIN // PROTEIN MISATO HOMOLOG 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCAGACTCACGTTCCGGCCCTCAGATGAAGAGAAGAGCGTGTCGTAG
Internal bar code:GGTAGAAGCTCACCGCGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1429
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCGCTTGTCTCACATGT
Suggested primer 2:CGACACCCACCTTGCAAAAG