Insertion junction: CLIP2.052196_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052196
Chromosome:chromosome 9
Location:3684106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397216 (1 of 3) K01832 - thromboxane-A synthase (TBXAS1, CYP5A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGGAGTGGCACGCGCCAATAGTGGGGGAAGGATGTCATGCCAAGTGC
Internal bar code:AGCAAACCGTTGACACCTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2174
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAAAACACGCCACGCAGG
Suggested primer 2:GTACGCACACACACACACAC