Insertion junction: CLIP2.052197_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052197
Chromosome:chromosome 14
Location:2854997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627050 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCATCGACGTTTTGGCTCTTCTCACGGGCGGCCTCCCGGTTTGGGCCC
Internal bar code:GGCCCCGCCGGGCGTTTTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1554
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCCACACGAAAGCAAC
Suggested primer 2:GGAGAGGAGCCGAATGTACG