Insertion junction: CLIP2.052200_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052200
Chromosome:chromosome 10
Location:1855055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431050 SRR13 (1 of 1) PTHR19331//PTHR19331:SF253 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED; Speract/scavenger receptor, transmembrane glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTTTCCTCCCCACCCGCCACCGGGGCACCCACCTTCACCGCGGCCGC
Internal bar code:TGCGATTTTGTCGTAGAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2499
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGTCAGGCATGTTACGA
Suggested primer 2:CCCTGTTACCCATGCCCAAT