Insertion junction: CLIP2.052205_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052205
Chromosome:chromosome 3
Location:3825352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170001 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTTCGAGTGGCATCGAAAGGGCCAAACACGAAGCCTTGGCAATCCAT
Internal bar code:GAAATTGTTAGGTAAGTTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2147
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGATCATGCACATGGC
Suggested primer 2:AAACATTCCGCACCGTTTGG