Insertion junction: CLIP2.052207_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052207
Chromosome:chromosome 3
Location:5154549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181000 (1 of 6) 2.8.2.8 - [Heparan sulfate]-glucosamine N-sulfotransferase / PAPS:N-desulfoheparin sulfotransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTCAGGGAAGACGGAGGTAATAGACACAGCAAGATGAGCATGGCTC
Internal bar code:CGCACAAGAGATTTTTGTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4996
LEAP-Seq percent confirming:84.7222
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAACGCCCCCGAAATATA
Suggested primer 2:CATGGTTTGTTTGACGGCGT