Insertion junction: CLIP2.052208_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052208
Chromosome:chromosome 14
Location:3069163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628050 COG1 Component of oligomeric golgi complex; (1 of 3) PF08700 - Vps51/Vps67 (Vps51) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACATGCGCACTGGCCACTGGCCTGATTCCTTGTGTCACTCGCGCCTGG
Internal bar code:TTCTAAGATGTGTATAACTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2973
LEAP-Seq percent confirming:98.6487
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAATGCAATCCGTACACC
Suggested primer 2:TCCCTAACTTGCCTTCGCTG