Insertion junction: CLIP2.052218_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052218
Chromosome:chromosome 2
Location:6728103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387541 (1 of 33) IPR015797 - NUDIX hydrolase domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGTGGCGCATGGACGGCACGCCGGACTCGCGCACGGGCGAACCACCG
Internal bar code:GTGTACGGAGAAAGAGATACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCCGTGCTATAATCTGT
Suggested primer 2:ACCGCTTTGTCGATGATGGT