Insertion junction: CLIP2.052220_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052220
Chromosome:chromosome 1
Location:4809124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033500 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACAAAAGTGAAGTTACGGGCCTGTGTTATGGCCACCCGTGTGCGGAT
Internal bar code:CGCGTCAGCGGTGAATGATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:891
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTCGATCGCATTACGG
Suggested primer 2:GCTAGTGGACCGATGAAGGG