Insertion junction: CLIP2.052223_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052223
Chromosome:chromosome 12
Location:5991329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCAGTTCACTCGAGCTCGGGCCGCCTGAGAACGAGACCTGGACAGTG
Internal bar code:TAGCGCTATGTAGGTTGTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGAGGGGATGGGGAAG
Suggested primer 2:CGCCTCCACTGCCACTTTTA