Insertion junction: CLIP2.052223_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052223
Chromosome:chromosome 12
Location:5991330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534200 (1 of 1) PTHR24365//PTHR24365:SF381 - TOLL-LIKE RECEPTOR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAACCCTAAGCTGGTCAGGGGAGGCAGAGCGGAAGCCAGCCCATAGAG
Internal bar code:ACGTTTCGAAAATCCTTGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2700
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTCCACTGCCACTTTTA
Suggested primer 2:TACAGGAGGGGATGGGGAAG