Insertion junction: CLIP2.052231_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052231
Chromosome:chromosome 12
Location:5460522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529800 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGTTCGAGGTGACACGCTGCACCAAATCCTCTATGCCGCGTGTAGC
Internal bar code:CATAAATTAGCTTATGCGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAAGTTCGCCACAGACTC
Suggested primer 2:GAGCTTGGCACAGACAGGAT