Insertion junction: CLIP2.052236_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052236
Chromosome:chromosome 3
Location:436085
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGACACCTCCACTCGCTCATCCCACACATCGCACACACGCCACGCCAA
Internal bar code:GCTGGACATTCAGATTACGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:64
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTCAACCCACTCTCCCC
Suggested primer 2:GACACAACAACCGCCATTCC