Insertion junction: CLIP2.052240_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052240
Chromosome:chromosome 6
Location:5434511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATATGTGAAGCAAGCAGTCCATACCATTGCCTTGCACAGCACGGCTCT
Internal bar code:GGCTTGCAATGCGCCTCCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAAGACGAGAACTGGGT
Suggested primer 2:CTCATGCGCTTCATCTGCAC