Insertion junction: CLIP2.052252_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052252
Chromosome:chromosome 12
Location:8304624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551100 (1 of 1) PTHR36356:SF1 - EXPRESSED PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTTGTGAAGCCATAAGCCCCCGACCCTCCTTGCACTAAACCGCTAA
Internal bar code:GTAGTTGCTGGCGGTGGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4018
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCGTCATCAGCCATTC
Suggested primer 2:AGTACTCACTTCTTGGCCGC