Insertion junction: CLIP2.052255_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052255
Chromosome:chromosome 5
Location:2979020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800568 (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGCGCACGCGTGTTCAGCGGCTTTGTTCCGTTTGTTTTGTGTTTAAC
Internal bar code:TGGTACTCGGCAATTTAATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTGGGTGTCAAATGAGA
Suggested primer 2:TGCCACTCAATCAGCTCCTG