Insertion junction: CLIP2.052256_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052256
Chromosome:chromosome 9
Location:5656182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410150 (1 of 140) IPR002048 - EF-hand domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGTGGGACGGGTAGGTGAGGGGATGCAAGAGGATGAGTGGACGAGA
Internal bar code:TTATGCTACTGGGAGCGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCGTACGTATGCGCCTA
Suggested primer 2:TGCGGACATGCACTTCTCTT