Insertion junction: CLIP2.052264_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052264
Chromosome:chromosome 5
Location:1928368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236050 (1 of 2) IPR015097 - Lung surfactant protein D coiled-coil trimerisation intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCGTGACACCACATGTTGGAACACGGCGCCCATCAGCTCTGCCGTGT
Internal bar code:GGGAGCATCGTTCTATTTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4078
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGAGCAACAGACAGGTC
Suggested primer 2:ATTGCACGGCTTCTGGATGA