Insertion junction: CLIP2.052264_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052264
Chromosome:chromosome 5
Location:1928391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236050 (1 of 2) IPR015097 - Lung surfactant protein D coiled-coil trimerisation intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCACTCACCCGGTGGGCCGTCTGCAGGGCGTTGACGTGAGCCGTCA
Internal bar code:AGGGATAGCAGACTGTATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2575
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCACGGCTTCTGGATGA
Suggested primer 2:TCACGAGCAACAGACAGGTC