Insertion junction: CLIP2.052272_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052272
Chromosome:chromosome 16
Location:616049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692000 (1 of 9) 3.1.3.2 - Acid phosphatase / Phosphomonoesterase CDS
lncRNA_TCONS_00196237 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCTGTCGGCAGCGGCCCACGATGGAGTGAGTAGTAGAAGCCATAGC
Internal bar code:GCTGGTAAGAGTGATGGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCCAGAGACGTGCTAGT
Suggested primer 2:CCTAGGTAGACCCCACCCAA