Insertion junction: CLIP2.052277_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052277
Chromosome:chromosome 16
Location:199997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694900 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTTTACCACCTAGCACCACGTACGCCCTCACGACACCTATGCGCTCCT
Internal bar code:TGGGATCCTATCGTATAATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACACCTTGCGCACTTGCTA
Suggested primer 2:GAAAGGTCTGTCAGCCACGA