Insertion junction: CLIP2.052284_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052284
Chromosome:chromosome 16
Location:2375256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659450 (1 of 3) 2.4.1.228 - Lactosylceramide 4-alpha-galactosyltransferase / Histo-blood group P(k) UDP-galactose CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCGTAGATGCGTTAAGGCAAATCTCGTGGTGTAAGGCCAACGCGCC
Internal bar code:AGGTTGTCCTGGGTAGTTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2602
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGAGGGGCATGACATCG
Suggested primer 2:CAACCACGTGAACAAGCTGG