Insertion junction: CLIP2.052291_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052291
Chromosome:chromosome 6
Location:5733970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288450 (1 of 1) PTHR14155//PTHR14155:SF102 - RING FINGER DOMAIN-CONTAINING // RING ZINC FINGER-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGGCAAGGATAGGATAAAGGTGCACGGTCCGCTGAAGGCTGACGGG
Internal bar code:AATGTACCACGTGTTGCGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4491
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGAAAAATTGGGGCGTG
Suggested primer 2:CTCTCGTGCACACCAACTCT