Insertion junction: CLIP2.052302_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052302
Chromosome:chromosome 6
Location:3462940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278107 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGAGTAGTTAATCCATCCACCGCTCGCGACTACTCGCCAGCTTTCC
Internal bar code:TTACCCGACATAGCTCTTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:409
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGGGTCATGTGGAAGTC
Suggested primer 2:GTCCAAGCTACCCCAACCTC