Insertion junction: CLIP2.052307_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052307
Chromosome:chromosome 7
Location:5856467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353750 MMP10 Metalloproteinase of VMP family; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTCTAGCGCAAACCCCCGGCCAAGACAAAAATAACATACAAGGTGAG
Internal bar code:CGACGAAGGCTTACAAAACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCATTCTTGTCCGCCT
Suggested primer 2:AAGTACTCAACTGCGCACGA