Insertion junction: CLIP2.052308_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052308
Chromosome:chromosome 6
Location:4838181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280227 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCTGAACACTCATTGGTTCTCACGTCGTAGGTCTCAAAGGAAAGGC
Internal bar code:GTGTTCTATGCCCCAGTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGGAGCGCTTGGATAGC
Suggested primer 2:GGAAAGGTGAGACTCTGGCC