Insertion junction: CLIP2.052313_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052313
Chromosome:chromosome 13
Location:4782735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604550 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGCGTGTGCTGCGGGCGACCACATACCGGTTCTGGGGGTGGCCTA
Internal bar code:TAGCCTGCTCCACCTCGTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTTGATGGGC
Suggested primer 2:ATCAAGGAGGCTGCCTTCAC