Insertion junction: CLIP2.052322_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052322
Chromosome:chromosome 3
Location:2548211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159800 (1 of 1) PTHR21262//PTHR21262:SF0 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAATTTGGTGCACAATACTTGCGAAGTTGATGGGCCCCAAGCATCACC
Internal bar code:CGTATTGCATTAGTAGCAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1199
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAAGCCTGCCCACATAGG
Suggested primer 2:TTCCTCACAGCGCATGGAAT