Insertion junction: CLIP2.052324_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.052324
Chromosome:chromosome 16
Location:412892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTCGCCGCGCCCAAGAGTTACTTGACGCTTTCACTCGGTTGCCGGGCA
Internal bar code:GTTTTCACTGTATGGGAGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2397
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCTAGAGTGCTCGTTCG
Suggested primer 2:AACAACTGCACCCCTTCCAA