Insertion junction: CLIP2.052324_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052324
Chromosome:chromosome 16
Location:412901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693601 ISG-C2,ISG2 (1 of 5) PTHR16631//PTHR16631:SF9 - FAMILY NOT NAMED // GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCTTGGCCACCAATTCTGCAGCTGCCTTTGATGTGCCGCTGTACGCG
Internal bar code:GTTTTCACTGTATGGGAGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1069
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AACAACTGCACCCCTTCCAA
Suggested primer 2:ATCGCTAGAGTGCTCGTTCG