Insertion junction: CLIP2.052330_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052330
Chromosome:chromosome 1
Location:5098966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035600 MSC2 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTCGTCGACGCCGCCGTCTCCTCCGGCCTGTCGGTGCAGAGCCAGTG
Internal bar code:CCTGAATGGTAGGGTCAGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCACTTCCACACACG
Suggested primer 2:GCCCTTCACTACCAGCCTAC