Insertion junction: CLIP2.052337_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052337
Chromosome:chromosome 3
Location:3527482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167600 CaM-IP3,FAP61 (1 of 1) PF16092 - Domain of unknown function (DUF4821) (DUF4821); Flagellar Associated Protein 61 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGAGCATGCAGCACCGGCCATGCATCAGCTTGCCCCTGGCAGCTGCA
Internal bar code:CATTGCCATTTTTAGGATTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2208
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTAAGTTGGCGGCAAAAA
Suggested primer 2:GCAGCAAACGGGTCAAATGT