Insertion junction: CLIP2.052338_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052338
Chromosome:chromosome 1
Location:2392553
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013650 (1 of 3) PF15612 - WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGACGATGAGGTGTGTGTGCGGGACAAAAGGGGTGCCCGAGTGCCGG
Internal bar code:ACCGGGACAGCGTCGGATCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:48.1481
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGACAACCAGTTTTCCAC
Suggested primer 2:TTGAGCTGTCGACAGAGCAG