Insertion junction: CLIP2.052348_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052348
Chromosome:chromosome 17
Location:1140422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704150 GDPD5,GDP5 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGTGCTTGCCCTTAGGCCAACCATACCGGACACGGGAGAGAGCTGGG
Internal bar code:TTCTTAGATATGGGTATCACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3836
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGATGGGGATGCCAAAG
Suggested primer 2:GTGACAGGTGCAAAGCAGTG