Insertion junction: CLIP2.052351_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052351
Chromosome:chromosome 17
Location:5402937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738600 RLS5 RegA/Rls-like protein; (1 of 10) IPR010919 - SAND domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACGGCCCGCCGCCGTACCCGCCGCCCCGTTACGGTCCCGCCGGTAGC
Internal bar code:TAGTCGAGGAGATACTAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1249
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCATGTCGTAGTACGC
Suggested primer 2:ACCATCATCACCAGGCCTTG