Insertion junction: CLIP2.052355_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052355
Chromosome:chromosome 12
Location:3849365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515050 HLM18,SET4 putative N-methyltransferase; (1 of 1) PTHR13793:SF5 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX4-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTCGCTGGCGCGCAGCGCCTCACGACCAGGCGAGGCCCCGGCGGCCC
Internal bar code:GTGAAACGTTGATGAGGGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1670
LEAP-Seq percent confirming:2.38095
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCATTGAACCTAGGGC
Suggested primer 2:GTGTGTCGGTCGTTTGTGTG