Insertion junction: CLIP2.052360_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052360
Chromosome:chromosome 16
Location:5083131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685650 GLR1 Ionotropic glutamate receptor; (1 of 4) PF00060//PF00497 - Ligand-gated ion channel (Lig_chan) // Bacterial extracellular solute-binding proteins, family 3 (SBP_bac_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAAACCCACAGCGCCGCACCTACCTGGATGTTGACGGCTGTCAGGCG
Internal bar code:ACAGGGTCGAATGAGGTCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:42.3077
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTGTCACTTGTGCCGC
Suggested primer 2:GCAGTTTGCAGCATCACACA