Insertion junction: CLIP2.052364_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052364
Chromosome:chromosome 8
Location:3238756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376950 MMP14 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGCAAGCGCTGTCGTCTGCCGCTGACTGCAGGCACACTCCAAATCCA
Internal bar code:CAGAGGGGCCTGTGCGGTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2478
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTGAGGGCGTGAGTAGG
Suggested primer 2:ATCGAGGCCTTTGGAACCTG