Insertion junction: CLIP2.052366_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052366
Chromosome:chromosome 13
Location:2874732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583217 (1 of 36) PF00583 - Acetyltransferase (GNAT) family (Acetyltransf_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATGTCCGGTCTTGTGGGGCCTAGCTCGATGCCCCTTGTGTATCGGGG
Internal bar code:CTTAAATTCTAGACATACAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1729
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGAATTTTGCGTGCCG
Suggested primer 2:CATTGGTTGGCTGGTGTTGG