Insertion junction: CLIP2.052375_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.052375
Chromosome:chromosome 6
Location:3546688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278122 (1 of 1) PTHR10504:SF73 - PROTEIN C05C9.1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGATCACCAGGCGCATCCTGAACACGAGCCCCTAAAGCACCGTGGAG
Internal bar code:GCCCTACTTACTATAACCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGTCCAGCTCAAACGA
Suggested primer 2:TAGCTCTTGGGCTTGAGTGC