Insertion junction: CLIP2.052376_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.052376
Chromosome:chromosome 12
Location:429229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495050 OPR51 OctotricoPeptide Repeat protein 51 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGCGTGTGTCCCAGGGCCGCCAGGGAGGAGACCAGGGAGGCCAGCT
Internal bar code:ATGTAGATTTATGAGAGCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTCTGGTTGC
Suggested primer 2:GTGAGCTCGACTACGACCAG