Insertion junction: CLIP2.052378_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.052378
Chromosome:chromosome 3
Location:6251612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAATCTTCGGAGGGGCAACATGCCTTGCGTGTTAAGGCATGGCTTTA
Internal bar code:AACGGTGAGGTAATGAAGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2003
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGTGTGTGCGTCGCATG
Suggested primer 2:CTGACTAGGGACACGCCATG