Insertion junction: CLIP2.052379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.052379
Chromosome:chromosome 6
Location:8876327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311700 FAP349 Leucine-Rich Repeat Flagellar Associated Protein 349 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGTGGTAAGTTCGATAACTGAGGAGATTGAAGAAGCGGCGCGCACAG
Internal bar code:GTGTCTGGGTTGAGGGGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2140
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGGCCACCCATACCCTT
Suggested primer 2:CGCGCATGATTTGAGACTGG