Insertion junction: CLIP2.052390_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.052390
Chromosome:chromosome 2
Location:3781580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800221 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTCGGACAACTCAGATGGAGTCAGCAGCGGCAGTAGCAGCGGCAGT
Internal bar code:TAGCTTTACACAGCAGGCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAATTGCACCGGTGTTGG
Suggested primer 2:AGCGCAGTCCCTTCAACTAC